Borisov N, Ilnytsky Y, Byeon B, Kovalchuk O, Kovalchuk I. Multi-omics data integration for topology-based pathway activation assessment and personalized drug ranking. Molecular Omics, 2025
‍

Vardazaryan N, Adunts L, Bazukyan I, Zakharyan M, Liu H, Melkonian Ch, Nersisyan L. Global distribution of honeybee gut microbiome and pesticide-driven adaptations in opportunistic microbial species. BioRxiv, 2025.
‍

Binder H, Hampel U, Loeffler-Wirth H, Hansmann F, Pfannkuche H, Schmidt M, Schneider MR. Spatial transcriptome analysis of the human eyelid depicts meibomian gland cell differentiation: A pilot study. Physiological Reports, 2025
‍

Schmidt M, Binder H, Schneider MR. The metabolic underpinnings of sebaceous lipogenesis. Communications Biology, 2025
‍

Konecny T, Asatryan A, Binder H. Responding to Stress: Diversity and Resilience of Grapevine in a Changing Climate Under the Perspective of Omics Research. International Journal of Molecular Sciences, 2025
‍

Hakobyan S, Schmidt M, Binder H, Arakelyan A. Topology-aware pathway analysis of spatial transcriptomics. PeerJ, 2025
‍

Hakobyan M, Binder H, Arakelyan A. Telomere Maintenance Pathways in Lower-Grade Gliomas: Insights from Genetic Subtypes and Telomere Length Dynamics. International Journal of Molecular Sciences, 2025
‍

Jalatyan T, Aznauryan E, Hasan R, Vardanyan V, Nersisyan S, Thompson DB, Davidsohn N, Thomas S, van Haren S, Tam J, Milanova D, Church GM, Nersisyan L. hafoe: an interactive tool for the analysis of chimeric AAV libraries after random mutagenesis. Gene Therapy, 2025
‍

Zhang Y, Nersisyan L, Fürst E, Alexopoulos I, Santolaria C, Huch S, Bassot C, Garre E, Sunnerhagen P, Piazza I, Pelechano V. Ribosomes modulate transcriptome abundance via generalized frameshift and out-of-frame mRNA decay. Molecular Cell, 2025
‍

Arakelyan A, Sirunyan T, Khachatryan G, Hakobyan S, Minasyan A, Nikoghosyan M, Hakobyan M, Chavushyan A, Martirosyan G, Hakobyan Y, Binder H. Assigning Transcriptomic Subtypes to Chronic Lymphocytic Leukemia Samples Using Nanopore RNA-Sequencing and Self-Organizing Maps. Cancers (Basel), 2025
‍

Ghukasyan L, Khachatryan G, Sirunyan T, Minasyan A, Hakobyan S, Chavushyan A, Hayrapetyan V, Ghazaryan H, Martirosyan G, Mkrtchyan G, Vardanyan V, Mukuchyan V, Davidyants A, Zakharyan R, Arakelyan A. Genewise detection of variants in MEFV gene using nanopore sequencing. Frontiers in Genetics, 2024
‍

Wahis J, Akkaya C, Kirunda AM, Mak A, Zeise K, Verhaert J, Gasparyan H, Hovhannisyan S, Holt MG. The astrocyte α1A-adrenoreceptor is a key component of the neuromodulatory system in mouse visual cortex. Glia, 2024
‍

Martirosyan A, Ansari R, Pestana F, Hebestreit K, Gasparyan H, Aleksanyan R, Hnatova S, Poovathingal S, Marneffe C, Thal DR, Kottick A, Hanson-Smith VJ, Guelfi S, Plumbly W, Belgard TG, Metzakopian E, Holt MG. Unravelling cell type-specific responses to Parkinson’s Disease at single cell resolution․ Molecular Neurodegeneration, 2024
‍

Bielefeld P, Martirosyan A, Martín-Suárez S, Apresyan A, Meerhoff GF, Pestana F, Poovathingal S, Reijner N, Koning W, Clement RA, Van der Veen I, Toledo EM, Polzer O, Durá I, Hovhannisyan S, Nilges BS, Bogdoll A, Kashikar ND, Lucassen PJ, Belgard TG, Encinas JM, Holt MG, Fitzsimons CP. Traumatic brain injury promotes neurogenesis at the cost of astrogliogenesis in the adult hippocampus of male mice. Nature Communications, 2024
‍

Turnbull K, Paternoga H, von der Weth E, Egorov AA, Pochopien AA, Zhang Y, et al. The ABCF ATPase New1 resolves translation termination defects associated with specific tRNAArg and tRNALys isoacceptors in the P site. Nucleic Acids Research, 2024
‍

Davitavyan S, Martirosyan G, Mkrtchyan G, Chavushyan A, Melkonyan A, Ghazaryan H, Binder H, Arakelyan A: Integrated analysis of -omic landscapes in breast cancer subtypes. F1000Research, 2024
‍

Hakobyan A, Meyenberg M, Vardazaryan N, Hancock J, Vulliard L, Loizou JI, et al. Pan-cancer analysis of the interplay between mutational signatures and cellular signaling. iScience, 2024
‍

Konecny T, Asatryan A, Nikoghosyan M, Binder H. Unveiling Iso- and Aniso-Hydric Disparities in Grapevine—A Reanalysis by Transcriptome Portrayal Machine Learning. Plants, 2024
‍

Dong Y, Duan S, Xia Q, Liang Z, Dong X, Margaryan K, Musayev M, Goryslavets S, Zdunić G, Bert PF, Lacombe T, Maul E, Nick P, Bitskinashvili K, Bisztray GD, Drori E, De Lorenzis G, Cunha J, Popescu CF, Arroyo-Garcia R, Arnold C, Ergül A, Zhu Y, Ma C, Wang S, Liu S, Tang L, Wang C, Li D, Pan Y, Li J, Yang L, Li X, Xiang G, Yang Z, Chen B, Dai Z, Wang Y, Arakelyan A, et al. Dual domestications and origin of traits in grapevine evolution. Science, 2023
‍